CDS

Accession Number TCMCG075C23703
gbkey CDS
Protein Id XP_017981600.1
Location join(4148572..4148604,4148980..4149045,4149137..4149472,4149573..4149770,4150622..4150695,4150917..4150986,4152862..4152914,4153065..4153122,4153205..4153563,4153654..4153726,4153972..4154070,4154248..4154316,4154402..4154479,4154676..4154762,4154847..4154881,4154985..4155090,4155860..4155940,4156033..4156179,4156255..4156371,4156482..4156580,4156708..4156755,4156833..4156925,4157077..4157184,4157295..4157359,4157499..4157601,4157852..4158157,4158235..4158372)
Gene LOC18591938
GeneID 18591938
Organism Theobroma cacao

Protein

Length 1032aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018126111.1
Definition PREDICTED: pre-mRNA-processing protein 40A [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-processing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12821        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070064        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCAACAATTCTCAACCCTCTAGTGCACAGCCACATTGGCCTCCTGCAGTTGGATCCTTGGGTCCTCAAAGTTATGGTTCTCCTTTATCTTCACAGTTCCGACCAGTCGTCCCAATGCAGCAAGGTCAGCACTTTGTTCCAGCTGCTTCCCAACAGTTTCGGCCTGTTGGGCAGGTTCCCTCTTCAAATGTTGGGATGCCAGCTGTTCAAAATCAGCAGATGCAGTTTTCTCAGCCAATGCAGCAGTTTCCACCACGGCCAAATCAACCTGGTCTTTCTGCACCTTCAGCACAGCCTATGCATGTACCATTTGGTCAAACAAACAGGCCACTTACATCTGGATCACCACAGTCACATCAAACTGCTCCCCCTTTGAATAGTCATATGCCAGGCTTAGGGGCCCCTGGAATGCCCCCCTCTTCATCATATAGTTATGTGCCATCTTCTTTTGGCCAGCCACAGAACAATGTCAGTGCATCGTCCCAGTTTCAGCCTACATCTCAAGTGCATGCACCTGTTGCTCCTGTGGCTGGACAACCTTGGTTGTCATCTGGAAATCAGAGTGTTTCACTTGCTATACCAATACAGCAGACTGGCCAACAACCTCCACTCATTTCTTCTGCAGATACAGCTGCCAATGCTCCTATTCTTACTCCGCCATCAGCTTCTGATTGGCAAGAGCATACATCTGCTGATGGAAGAAGATACTATTACAACAAAAAGACGAGGCAATCTAGTTGGGAAAAGCCTCTGGAACTGATGACACCAATAGAGAGAGCTGATGCGTCCACTGTTTGGAAGGAATTTACAACTCCAGAGGGAAGAAAGTATTATTATAACAAGGTTACAAAGCAATCTAAGTGGACAATACCTGAGGAATTGAAGTTAGCTCGTGAGCAAGCTCAGGTAGTAGCTAGCCAAGGAGCCCCATCAGATACAGGAGTGGCTTCTCAAGCGCCAGTTGCTGGTGCTGTCTCCTCAGCTGAGATGCCTGCTGCAGCTATTCCTGTGAGCTCCAACACTTCGCAGGCTTCAAGCCCAGTATCAGTTACGCCTGTTGCTGCTGTTGCTAATCCTTCCCCTACTTTAGTATCTGGATCAACAGTTGTTCCTGTTTCACAATCTGCTGCAACGAATGCATCTGAGGTTCAATCACCTGCAGTTGCTGTTACCCCCTTACCTGCTGTTTCCTCCGGAGGTTCTACTACTCCTGTTACTTCGGTCAATGCTAACACAACAATGATAAGAAGCTTGGAAAGTACAGCATCTCAAGATTCTGTGCATTTCACAAATGGAGCTTCTGCTCAGGACATTGAGGAAGCAAAAAAGGGGATGGCAACGGCTGGAAAGGTTAATGTGACTCCAGTGGAAGAGAAAGTTCCGGATGATGAGCCTTTAGTATATGCAAATAAGCAGGAAGCAAAAAATGCTTTCAAATCCCTCCTTGAATCCGCAAATGTGCAATCTGATTGGACTTGGGAGCAGACAATGAGAGAAATAATTAATGACAAAAGGTATGGTGCTTTGAAGACACTTGGGGAGCGGAAGCAAGCCTTTAATGAGTATTTGGGTCAAAGGAAAAAGCTAGAGGCTGAGGAAAGGCGCATGAGACAGAAGAAAGCTCGGGAGGAATTCACAAAGATGCTTGAAGAGTCCAAGGAACTCACATCATCCATGAGATGGAGCAAAGCTCAAAGTTTATTTGAAAATGATGAAAGATTCAAGGCTGTTGAACGAGCCAGAGACCGGGAAGATCTTTTTGAAAATTATATAGTGGAACTTGAGAGAAAGGAAAGGGAAAATGCTGCAGAGGAAAAAAGGCGGAATATAGCAGAATACAGGAAATTTCTGGAATCCTGTGATTTTATTAAGGCAAACAGCCAGTGGCGGAAAGTTCAAGACCGCTTAGAGGATGATGAAAGATGCTCACGTCTTGAAAAAATTGATCGCTTGGTCATGTTCCAGGACTACATTCATGACTTGGAGAAGGAAGAAGAGGAAAAAAAGAAGATGCAAAAGGAACAATTGAGACGTGCCGAGCGCAAAAACCGTGACGCATTCCGTAAGCTTATGGACGAACATGTTGTTGATGGCACTCTTACGGCTAAAACTTACTGGCGGGATTATTGTTTGAAGGTGAAAGATCTGCCCCCATATCTTGCTGTTGCATCAAACACATCTGGTTCAACACCAAAAGATTTGTTTGAGGATGTTGTTGAAGAATTAGAAAAACAGTATCAGCAAGACAAAACCCATATTAAAGATGCAATGAAGTCAGGGAAGATTTCCATGGTTTCCACATGGACAGTTGAAGACTTCAAAGCTGCTATTTCAGAAGATGTTGGTTCCTTGCCAATATCAGATATAAACTTAAAGCTTGTGTATGAGGAGTTACTCAAGAGCGCCAAGGAGAAGGAGGAGAAAGAGGCTAAGAAACGTCAGCGTCTAGCAGATGACTTCACTAAGCTATTACATACATATAAGGAGATAACTGCATCCTCTGATTGGGAGGATTCCAGACCACTTTTTGAAGAAAGCCAAGAATACAGATCAATTGCGGAAGAGAGTTTAAGGAGAGAGATCTTCGAGGAATACATTGCATACTTACAGGAAAAAGCTAAAGAAAAGGAGCGCAAGCGTGAGGAGGAAAAGGCCAAAAAGGAGAAAGAGCGAGAAGAGAAAGAGAAACGAAAGGAGAAGGAGAGAAAGGAGAAGGAAAGAGAACGTGAAAGGGAAAAGGGTAAGGAGCGAACTAAAAAAGATGAAACAGATAGTGAGAATTTAGATATATCTGACAGTCATGGCCATAAAGAGGACAAGAAAAAGGAAAAAGAAAAAGATAGGAAACACCGCAAACGACATCAAAGTGGTGGTGATGATGGGAGTTCCGATAAGGATGATAGGGAGGAGTCTAAGAAGTCTCGCAGACACGGCAGTGACCGTAAGAAATCAAGAAAGCATGCGCACTCACCTGAATCTGACAATGAAAGCCGGCATAAAAAGCACAAGAGAGATCACCGCGATGGATCGCGTAGAAACAGTGGTTATGAGGAGCTGGAAGATGGTGAAGTTGGTGAGGACGGTGAAATTCAGTAG
Protein:  
MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQVPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHAPVAPVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPILTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQEKAKEKERKREEEKAKKEKEREEKEKRKEKERKEKEREREREKGKERTKKDETDSENLDISDSHGHKEDKKKEKEKDRKHRKRHQSGGDDGSSDKDDREESKKSRRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRNSGYEELEDGEVGEDGEIQ